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35 commits

Author SHA1 Message Date
martinsumner
102cfe7f6f Move towards Inker Key Types
The current mechanism of re-loading data from the Journla to the Ledger
from any potential SQN is not safe when combined with Journla
compaction.

This commit doesn't resolve thes eproblems, but starts the groundwork
for resolving by introducing Inker Key Types.  These types would
differentiate between objects which are standard Key/Value pairs,
objects which are tombstones for keys, and objects whihc represent Key
Changes only.

The idea is that there will be flexible reload strategies based on
object tags
- retain (retain a key change object when compacting a standard object)
- recalc (allow key changes to be recalculated from objects and ledger
state when loading the Ledger from the journal
- recover (allow for the potential loss of data on loss within the
perisste dpart of the ledger, potentially due to recovery through
externla anti-entropy operations).
2016-10-25 01:57:12 +01:00
martinsumner
c78b5bca7d Basement Tombstones
Further progress towards the tidying up of basement tombstones in the
Ledger, with support added for key-listing to help with testing (and as
a potentially required feature).

The test is incomplete, but committing at this stage as the last commit
broke some tests (within the test code).

There are some outstanding questions about the handling of tombstones in
the Journal during compaction.  There exists a condition whereby values
could return if a recent journal is compacted and tombstones are removed
(as they are no longer present), but older journals have not been
compacted.  Now on stop/start - if the Ledger is wiped the removal of
the keys will be forgotten but the original PUTs would still remain.

The safest thing maybe to have rule that tombstones are never deleted
from the Inker's Journal - and accept the build-up of garbage.  Or there
could be an addition to the compaction process that checks back through
all the inker files to check that the Key of a tombstone is not present
in the past, before it is removed in the compaction.
2016-10-23 22:45:43 +01:00
martinsumner
cf66431c8e Smoother handling of back-pressure
The Penciller had two problems in previous commits:
- If it had a push_mem soon after a L0 file had been created, the
push_mem would stall waiting for the L0 file to complete - and this
count take 100-200ms
- The penciller's clerk favoured L0 work, but was lazy about asking for
other work in-between, so often the L1 layer was bursting over capacity
and the clerk was doing nothing but merging more L0 files in (with those
merges getting more and more expensive as they had to cover more and
more files)

There are some partial resolutions to this.  There is now an aggressive
timeout when checking whther the L0 file is ready on a push_mem, and if
the timeout is breached the error is caught and a 'returned' message
goes back to the Bookie.  the Bookie doesn't now empty its cache, it
carrie son filling it, but on some probability it will keep trying to
push_mem on future pushes.  This increases Jitter around the expensive
operation and split out the L0 delay into defined chunks.

The penciller's clerk is now more aggressive in asking for work.  There
is also some simplification of the relationship between clerk timeouts
and penciller back-pressure.

Also resolved is an issue of inconcistency between the loader and the on
startup (replaying the transaction log) and the standard push_mem
process.  The loader was not correctly de-duplicating by adding first
(in order) to a tree before outputting the list from the tree.

Some thought will be given later as to whether non-L0 work can be safely
prioritised if the merge process still keeps getting behind.
2016-10-20 02:23:45 +01:00
martinsumner
12fe1d01bd Penciller Manifest and Locking
The penciller had the concept of a manifest_lock - but it wasn't clear
what the purpose of it was.

The updating of the manifest has now been updated to reduce the code and
make the process cleaner and more obvious.  Now the committed manifest
only covers non-L0 levels.  A clerk can work concurrently on a manifest
change whilst the Penciller is accepting a new L0 file.

On startup the manifets is opened as well as any L0 file.  There is a
possible race condition with killing process where there may be a L0
file which is merged but undeleted - and this is believed to be inert.

There is some outstanding work still.  Currently the whole store is
paused if a push_mem is received by the Penciller, and the writing of a
L0 sft file has not been completed.  The creation of a L0 file appears
to take about 300ms, so if the ledger_cache fills in this period a pause
will occurr (perhaps due to objects with lots of index entries).  It
would be preferable to pause more elegantly in this situation.  Perhaps
there should be a harsh timeout on the call to check the SFT complete,
and catching it should cause a refused response.  The next PUT will then
wait, but a any queued GETs can progress.
2016-10-19 17:34:58 +01:00
martinsumner
f16f71ae81 Revert ominshambles performance refactoring
To try and improve performance index entries had been removed from the
Ledger Cache, and a shadow list of the LedgerCache (in SQN order) was
kept to avoid gb_trees:to_list on push_mem.

This did not go well.  The issue was that ets does not deal with
duplicate keys in the list when inserting (it will only insert one, but
it is not clear which one).

This has been reverted back out.

The ETS parameters have been changed to [set, private].  It is not used
as an iterator, and is no longer passed out of the process (the
memtable_copy is sent instead).  This also avoids the tab2list function
being called.
2016-10-19 00:10:48 +01:00
martinsumner
8f29a6c40f Complete 2i work - some refactoring
The 2i work now has tests for removals as well as regex etc.

Some initial refactoring work has also been tried - to try and take some
tasks of the critical path of push_mem.  The primary change has been to
avoid putting index keys into the gb_tree, and building the KeyChanges
list in parallel to the gb_tree (now known as ObjectTree) within the
Ledger Cache.

Some initial experiments done as to changing the ETS table in the
Penciller now that it will now be used for iterating - but that has been
reverted for now.
2016-10-18 19:41:33 +01:00
martinsumner
3e475f46e8 Support for 2i query part1
Added basic support for 2i query.  This involved some refactoring of the
test code to share functions between suites.

There is sill a need for a Part 2 as no tests currently cover removal of
index entries.
2016-10-18 01:59:18 +01:00
martinsumner
8653e9d90d Improve inker unit test
Change in filename labelling had stopped a unit test from covering
stratup correctly.  Now offering better coverage
2016-10-16 16:58:55 +01:00
martinsumner
de54a28328 Load and Count test
This test exposed two bugs:
- Yet another set of off-by-one errors (really stupidly scanning the
Manifest from Level 1 not Level 0)
- The return of an old issue related to scanning the journal on load
whereby we fail to go back to the previous file before the current SQN
2016-10-13 17:51:47 +01:00
martinsumner
0a08867280 Iterator support
Add iterator support, used initially only for retrieving bucket
statistics.

The iterator is supported by exporting a function, and when the function
is claled it will take a snapshot of the ledger, run the iterator and
hten close the snapshot.

This required a numbe rof underlying changes, in particular to get key
comparison to work as "expected".  The code had previously misunderstood
how comparison worked between Erlang terms, and in particular did not
account for tuple length being compared first by size of the tuple (and
not just by each element in order).
2016-10-12 17:12:49 +01:00
martinsumner
d2cc07a9eb Doc update and clerk<->penciller changes
Reviewing code to update comments revealed a weakness in the sequence of
events between penciller and clerk committing a manifest change wherby
an ill-timed crash could lead to files being deleted without the
manifest changing.

A different, and safer pattern now used between theses two actors.
2016-10-09 22:33:45 +01:00
martinsumner
4a8a2c1555 Code reduction refactor
An attempt to refactor out more complex code.

The Penciller clerk and Penciller have been re-shaped so that there
relationship is much simpler, and also to make sure that they shut down
much more neatly when the clerk is busy to avoid crashdumps in ct tests.

The CDB now has a binary_mode - so that we don't do binary_to_term twice
... although this may have made things slower ??!!?  Perhaps the
is_binary check now required on read is an overhead.  Perhaps it is some
other mystery.

There is now a more effiicient fetching of the size on pcl_load now as
well.
2016-10-08 22:15:48 +01:00
martinsumner
8dfeb520ef Inker Refactor
Inker refactored to block on manifest write.  If this is inefficient the
manifets write can be converted ot an append only operation.

Waiting on the manifest write makes the logic at startup much easier to
manage.
2016-10-07 18:07:03 +01:00
martinsumner
2055f8ed3f Add more complex snapshot test
This exposed another off-by-one error on startup.

This commit also includes an unsafe change to reply early from a rolling
CDB file (with lots of objects writing the hash table can take too
long).  This is bad, but will be resolved through a refactor of the
manifest writing:  essentially we deferred writing of the manifest
update which was an unnecessary performance optimisation.  If instead we
wait on this, the process is made substantially simpler, and it is safer
to perform the roll of the complete CDB journal asynchronously.  If the
manifest update takes too long, an append-only log may be used instead.
2016-10-07 10:04:48 +01:00
martinsumner
ad5aebe93e Further work on system tests
Another issue exposed with laziness in the using an incomplete ledger
when checking for presence during compaction.
2016-10-05 18:28:31 +01:00
martinsumner
d903f184fd Add initial end-to-end common tests
These tests highlighted some logical issues when scanning over databases
on startup, so fixes are wrapped in here.
2016-10-05 09:54:53 +01:00
martinsumner
507428bd0b Add initial system test
Add some initial system tests.  This highlighted issues:
- That files deleted by compaction would be left orphaned and not close,
and would not in fact delete (now deleted by closure only)
- There was an issue on stratup that the first few keys in each journal
would not be re-loaded into the ledger
2016-10-03 23:34:28 +01:00
martinsumner
15f57a0b4a Further Journal compaction tests
Improved unit testing
2016-09-28 18:26:52 +01:00
martinsumner
50b50ba486 Inker Clerk - Further Testing
Expanded the unit tetsing of the Inker Clerk actor.  Still WIP
2016-09-28 11:41:56 +01:00
martinsumner
d24b100aa6 Initial work on Journal Compaction
Largely untested work at this stage to allow for the Inker to request
the Inker's clerk to perform a single round of compact based on the best
run of files it can find.
2016-09-27 14:58:26 +01:00
martinsumner
e2bb09b873 Snapshot testing
Work to test the checking of sequence numbers in snapshots as required
by the inkers clerk to calculate the percentage of a file which is
compactable
2016-09-26 10:55:08 +01:00
martinsumner
c64d67d9fb Snapshot Work - Interim Commit
Some initial work to get snapshots going.

Changes required, as need to snapshot through the Bookie to ensure that
there is no race between extracting the Bookie's in-memory view and the
Penciller's view if a push_to_mem has occurred inbetween.

A lot still outstanding, especially around Inker snapshots, and handling
timeouts
2016-09-23 18:50:29 +01:00
martinsumner
4e28e4173c Rebar and eunit changes
Initial rebar compile - which exposed eunit tets failures associated
with changes to file structures and filename references
2016-09-19 18:50:11 +01:00
martinsumner
a1c970a66a Manifest ordering
Be more explicit about manifest ordering to stop keys being laoded in
incorrect order
2016-09-19 15:56:35 +01:00
martinsumner
7c28ffbd96 Further bookie test - CDB optimisation and Inker manifest correction
Additional bookie test revealed that the persisting/reading of inker
manifests was inconsistent and buggy.

Also, the CDB files were inffeciently writing the top index table -
needed to be improved as this is blokicng on a roll
2016-09-19 15:31:26 +01:00
martinsumner
b452fbe27c End-to-end test
Changes to ensure working of first end-to-end test (with a single Key
and Value)
2016-09-15 18:38:23 +01:00
martinsumner
e73a5bbf31 WIP - First draft of Bookie code
First draft of untested bookie code
2016-09-15 10:53:24 +01:00
martinsumner
86666b1cb6 Scan over CDB file
Make scanning over a CDB file generic rather than specific to read-in of
active nursery log - open to be called as an external function to
support other scanning behaviour.
2016-09-09 15:58:19 +01:00
martinsumner
edfe9e3bed Improved testing
Improve testing of Penciller to show startup and shutdown with push,
merging and fetch
2016-09-08 14:21:30 +01:00
martinsumner
0d905639be Testing of Inker rolling Journal
Add test to show inker rolling journal.  to achieve needs to make CDB
size an option, and also alter the manifest sorting so that
find_in_manifest actually works!
2016-09-07 17:58:12 +01:00
martinsumner
f0e1c1d7ea Basic GET/PUT and rolling in Inker
Add support to roll file on PUT in the inker
2016-09-06 17:17:31 +01:00
martinsumner
f3a40e106d Inker improvements
Resolve issue in CDB file when we have cached the index.  Allow for
Inker to find keys in the active journal
2016-09-05 20:22:16 +01:00
martinsumner
2a76eb364e Inker - Initial Code
An attempt to get a first inker that can build a ledger from a manifest
as well as support simple get and put operations.  Basic tests surround
the building of manifests only at this stage - more work required for
get and put.
2016-09-05 15:01:23 +01:00
martinsumner
33f1efd576 Work on descriptions
Add further descriptions of roles following name changes.  Attempt to
simplify manifest management in the Penciller by assuming there is only
one Penciller's Clerk active - and so only one piece of work can be
ongoing
2016-08-02 17:51:43 +01:00
martinsumner
2bdb5fba6c Re-naming
Naming things is hard.  This change renames things based on the
Bookie/Inker/Penciller terminology
2016-08-02 13:44:48 +01:00